Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2956
Gene Symbol: MSH6
MSH6
0.800 CausalMutation disease CLINVAR Yield of routine molecular analyses in colorectal cancer patients ≤70 years to detect underlying Lynch syndrome. 22081473 2012
Entrez Id: 80204
Gene Symbol: FBXO11
FBXO11
0.100 CausalMutation disease CLINVAR Yield of routine molecular analyses in colorectal cancer patients ≤70 years to detect underlying Lynch syndrome. 22081473 2012
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
1.000 GeneticVariation disease BEFREE Worldwide, the DNA mismatch repair genes MSH2 and MLH1 account for a major share and almost equal proportions of hereditary nonpolyposis colorectal cancer (HNPCC). 10200055 1998
Entrez Id: 2956
Gene Symbol: MSH6
MSH6
0.800 GeneticVariation disease CLINVAR Working through a diagnostic challenge: colonic polyposis, Amsterdam criteria, and a mismatch repair mutation. 18176851 2008
Entrez Id: 2956
Gene Symbol: MSH6
MSH6
0.800 CausalMutation disease CLINVAR Working through a diagnostic challenge: colonic polyposis, Amsterdam criteria, and a mismatch repair mutation. 18176851 2008
Entrez Id: 80204
Gene Symbol: FBXO11
FBXO11
0.100 GeneticVariation disease CLINVAR Working through a diagnostic challenge: colonic polyposis, Amsterdam criteria, and a mismatch repair mutation. 18176851 2008
Entrez Id: 80204
Gene Symbol: FBXO11
FBXO11
0.100 CausalMutation disease CLINVAR Working through a diagnostic challenge: colonic polyposis, Amsterdam criteria, and a mismatch repair mutation. 18176851 2008
Entrez Id: 675
Gene Symbol: BRCA2
BRCA2
0.100 Biomarker disease BEFREE Women with familial cancer syndromes such as hereditary breast and ovarian cancer syndrome (BRCA1 and BRCA2) and Lynch syndrome are at a significantly increased risk of developing ovarian cancer and are advised to undergo prophylactic removal of their ovaries and fallopian tubes at age 35 to 40 years, after childbearing is complete. 28333842 2017
Entrez Id: 672
Gene Symbol: BRCA1
BRCA1
0.100 Biomarker disease BEFREE Women with familial cancer syndromes such as hereditary breast and ovarian cancer syndrome (BRCA1 and BRCA2) and Lynch syndrome are at a significantly increased risk of developing ovarian cancer and are advised to undergo prophylactic removal of their ovaries and fallopian tubes at age 35 to 40 years, after childbearing is complete. 28333842 2017
Entrez Id: 2956
Gene Symbol: MSH6
MSH6
0.800 GeneticVariation disease BEFREE Women who were MSH6 mutation carriers had a 26-fold increased incidence of endometrial cancer (HR = 25.5, 95% CI = 16.8 to 38.7) and a sixfold increased incidence of other cancers associated with Lynch syndrome (HR = 6.0, 95% CI = 3.4 to 10.7). 20028993 2010
Entrez Id: 4360
Gene Symbol: MRC1
MRC1
0.100 GeneticVariation disease BEFREE Women who are MMR gene mutation carriers or who fulfil the Amsterdam criteria were identified from our HNPCC database. 14529665 2003
Entrez Id: 672
Gene Symbol: BRCA1
BRCA1
0.100 GeneticVariation disease BEFREE Women found to have LS in this study underwent prophylactic gynecologic surgery at rates comparable to those published for BRCA1/2 mutation carriers. 22940489 2012
Entrez Id: 675
Gene Symbol: BRCA2
BRCA2
0.100 GeneticVariation disease BEFREE Within this group, germline mutations in mismatch repair (MMR) genes, known otherwise as Lynch syndrome (LS), account for the majority of cases that are not associated with mutations in BRCA1 or BRCA2. 24113308 2013
Entrez Id: 672
Gene Symbol: BRCA1
BRCA1
0.100 GeneticVariation disease BEFREE Within this group, germline mutations in mismatch repair (MMR) genes, known otherwise as Lynch syndrome (LS), account for the majority of cases that are not associated with mutations in BRCA1 or BRCA2. 24113308 2013
Entrez Id: 4360
Gene Symbol: MRC1
MRC1
0.100 GeneticVariation disease BEFREE Within this group, germline mutations in mismatch repair (MMR) genes, known otherwise as Lynch syndrome (LS), account for the majority of cases that are not associated with mutations in BRCA1 or BRCA2. 24113308 2013
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
1.000 Biomarker disease BEFREE With the development of the International Hereditary Nonpolyposis Colorectal Cancer Collaborative Group, knowledge can be disseminated worldwide about the public health importance of HNPCC and the need to implement highly targeted surveillance and management strategies in all clinical practice settings. 7979196 1994
Entrez Id: 4292
Gene Symbol: MLH1
MLH1
0.900 Biomarker disease BEFREE With the development of the International Hereditary Nonpolyposis Colorectal Cancer Collaborative Group, knowledge can be disseminated worldwide about the public health importance of HNPCC and the need to implement highly targeted surveillance and management strategies in all clinical practice settings. 7979196 1994
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.060 Biomarker disease BEFREE Whole-genome mRNA expression profiles of 41 tumors and immunohistochemical stainings against FGFR3, KRT5, CCNB1, RB1, and CDKN2A (p16) of 37 tumors from patients with Lynch syndrome were generated. 29791078 2018
Entrez Id: 2052
Gene Symbol: EPHX1
EPHX1
0.300 Biomarker disease CLINGEN Whole-exome sequencing identifies rare pathogenic variants in new predisposition genes for familial colorectal cancer. 25058500 2015
Entrez Id: 6597
Gene Symbol: SMARCA4
SMARCA4
0.300 Biomarker disease CLINGEN Whole-exome sequencing identifies rare pathogenic variants in new predisposition genes for familial colorectal cancer. 25058500 2015
Entrez Id: 7518
Gene Symbol: XRCC4
XRCC4
0.300 Biomarker disease CLINGEN Whole-exome sequencing identifies rare pathogenic variants in new predisposition genes for familial colorectal cancer. 25058500 2015
Entrez Id: 64332
Gene Symbol: NFKBIZ
NFKBIZ
0.300 Biomarker disease CLINGEN Whole-exome sequencing identifies rare pathogenic variants in new predisposition genes for familial colorectal cancer. 25058500 2015
Entrez Id: 1027
Gene Symbol: CDKN1B
CDKN1B
0.300 Biomarker disease CLINGEN Whole-exome sequencing identifies rare pathogenic variants in new predisposition genes for familial colorectal cancer. 25058500 2015
Entrez Id: 580
Gene Symbol: BARD1
BARD1
0.300 Biomarker disease CLINGEN Whole-exome sequencing identifies rare pathogenic variants in new predisposition genes for familial colorectal cancer. 25058500 2015
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
1.000 GeneticVariation disease BEFREE Whole exome sequencing was performed on three MMR-deficient sebaceous lesions from individuals with MSH2 gene mutations (Lynch syndrome) and three MMR-proficient sebaceous lesions from individuals without Lynch syndrome with the aim of characterizing the tumor mutational signatures, somatic mutation burden, and microsatellite instability status. 31162827 2019